Undergraduate Subjects
Introductory Biology
All five subjects cover the same core material, comprising about 50% of the course, while the remaining material is specialized for each version as described below. Core material includes fundamental principles of biochemistry, genetics, molecular biology, and cell biology. These topics address structure and regulation of genes, structure and synthesis of proteins, how these molecules are integrated into cells and how cells communicate with one another.
7.012 Introductory Biology
 ( ) 
Prereq: None
Units: 5-0-7
Credit cannot also be received for 7.013, 7.014, 7.015, 7.016, ES.7012, ES.7013
 Lecture: MWF10 (10-250) Recitation: TR9 (26-210) or TR10 (26-204, 26-210, 26-168, 26-328) or TR11 (26-204, 26-210) or TR12 (26-204, 26-210) or TR1 (26-204, 26-210) or TR2 (26-204, 26-210) or TR3 (26-210) +final
Exploration into biochemistry and structural biology, molecular and cell biology, genetics and immunology, and viruses and bacteria. Special topics can include cancer biology, aging, and the human microbiome project. Enrollment limited to seating capacity of classroom. Admittance may be controlled by lottery.
O. Corradin, E. Lander
No textbook information available
7.013 Introductory Biology
( )
Prereq: None
Units: 5-0-7
Credit cannot also be received for 7.012, 7.014, 7.015, 7.016, ES.7012, ES.7013
Genomic approaches to human biology, including neuroscience, development, immunology, tissue repair and stem cells, tissue engineering, and infectious and inherited diseases, including cancer.
Enrollment limited to seating capacity of classroom. Admittance may be controlled by lottery.
Staff
7.014 Introductory Biology
()
Units: 5-0-7
Credit cannot also be received for 7.012, 7.013, 7.015, 7.016, ES.7012, ES.7013
Studies the fundamental principles of biology and their application towards understanding the Earth as a dynamic system shaped by life. Focuses on environmental life science with an emphasis on biogeochemistry, population genetics, population and community ecology, evolution, and the impact of climate change. Enrollment limited to seating capacity of classroom. Admittance may be controlled by lottery.
G. C. Walker, D. Des Marais
7.015 Introductory Biology
()
Prereq: None
Units: 5-0-7
Credit cannot also be received for 7.012, 7.013, 7.014, 7.016, ES.7012, ES.7013
Lecture: TR9.30-11 (4-370) Recitation: WF10 (38-166) or WF11 (38-166) or WF12 (38-166) or WF1 (36-372) or WF2 (36-372) +final
Emphasizes the application of fundamental biological principles to modern, trending topics in biology. Specific modules focus on antibiotic resistance, biotechnology (e.g., genetically-modified organisms and CRISPR-based genome editing), personal genetics and genomics, viruses and vaccines, ancient DNA, and the metabolism of drugs. Includes discussion of the social and ethical issues surrounding modern biology. Limited to 60; admittance may be controlled by lottery.
M. Laub, S. Vos
Textbooks (Fall 2024)
7.016 Introductory Biology
()
Prereq: None
Units: 5-0-7
Credit cannot also be received for 7.012, 7.013, 7.014, 7.015, ES.7012, ES.7013
Introduction to fundamental principles of biochemistry, molecular biology and genetics for understanding the functions of living systems. Covers examples of the use of chemical biology, the use of genetics in biological discovery, principles of cellular organization and communication, immunology, cancer, and engineering biological systems. In addition, includes 21st-century molecular genetics in understanding human health and therapeutic intervention. Enrollment limited to seating capacity of classroom. Admittance may be controlled by lottery.
S. Hrvatin, A. Martin
7.00 COVID-19, SARS-CoV-2 and the Pandemic
 ()
Prereq: None
Units: 1-0-1 [P/D/F]
Lectures by leading experts on the fundamentals of COVID-19 epidemiology, coronavirus and host cell biology, immunity, vaccine development, clinical disease and therapy. Subject can count toward the 6-unit discovery-focused credit limit for first year students.
R. Young, F. Batista
7.002 Fundamentals of Experimental Molecular Biology
(, ) 
Prereq: None
Units: 1-4-1
Lecture: M1-2.30 (68-181) Lab: W1-4.30 (68-074) or F1-4.30 (68-074)
Introduces the experimental concepts and methods of molecular biology. Covers basic principles of experimental design and data analysis, with an emphasis on the acquisition of practical laboratory experience. Satisfies 6 units of Institute Laboratory credit. Satisfies biology laboratory credit for pre-health professions. Enrollment limited.
Fall: T. Baker, T. Schwartz
Spring: T. Baker, T. Schwartz
No required or recommended textbooks
7.003[J] Applied Molecular Biology Laboratory
(, )
(Same subject as 10.7003[J])
Prereq: 7.002
Units: 2-7-3
Lecture: T1 (68-181) Lab: T2-5,R1-5 (68-074) Recitation: T11-12.30 (68-121)
Laboratory-based exploration of modern experimental molecular biology. Specific experimental system studied may vary from term to term, depending on instructor. Emphasizes concepts of experimental design, data analysis and communication in biology and how these concepts are applied in the biotechnology industry. Satisfies 6 units of Institute Laboratory credit. Enrollment limited; admittance may be controlled by lottery.
Fall: E. Calo, K. Knouse
Spring: L. Case
No required or recommended textbooks
7.03 Genetics
(, ) 
Prereq: Biology (GIR)
Units: 4-0-8
Lecture: MWF11 (4-370) Recitation: M2 (26-204) or M3 (26-204) or T11 (26-314) or T12 (26-314) or T1 (26-322) or T2 (26-322) or W12 (26-322) or W1 (26-322) +final
The principles of genetics with application to the study of biological function at the level of molecules, cells, and multicellular organisms, including humans. Structure and function of genes, chromosomes, and genomes. Biological variation resulting from recombination, mutation, and selection. Population genetics. Use of genetic methods to analyze protein function, gene regulation, and inherited disease.
Fall: M. Gehring, P. Reddien
Spring: O. Corradin, F. Sanchez-Rivera
Textbooks (Fall 2024)
7.05 General Biochemistry
()
Prereq: (Biology (GIR) and 5.12) or permission of instructor
Units: 5-0-7
Credit cannot also be received for 5.07, 20.507
Contributions of biochemistry toward an understanding of the structure and functioning of organisms, tissues, and cells. Chemistry and functions of constituents of cells and tissues and the chemical and physical-chemical basis for the structures of nucleic acids, proteins, and carbohydrates. Basic enzymology and biochemical reaction mechanisms involved in macromolecular synthesis and degradation, signaling, transport, and movement. General metabolism of carbohydrates, fats, and nitrogen-containing materials such as amino acids, proteins, and related compounds.
A. Ringel, M. Vander Heiden, M. Yaffe
7.06 Cell Biology
(, )
Prereq: 7.03 and 7.05
Units: 4-0-8
Lecture: MW1-2.30 (4-270) Recitation: F10 (26-204) or F11 (26-204) or F12 (26-204) or F1 (26-204) or F2 (26-204) +final
Presents the biology of cells of higher organisms. Studies the structure, function, and biosynthesis of cellular membranes and organelles; cell growth and oncogenic transformation; transport, receptors, and cell signaling; the cytoskeleton, the extracellular matrix, and cell movements; cell division and cell cycle; functions of specialized cell types. Emphasizes the current molecular knowledge of cell biological processes as well as the genetic, biochemical, and other experimental approaches that resulted in these discoveries.
Fall: S. Lourido
Spring: K. Knouse, R. Lamason
Textbooks (Fall 2024)
7.08[J] Fundamentals of Chemical Biology
()
(Same subject as 5.08[J])
(Subject meets with 7.80)
Prereq: (Biology (GIR), 5.13, and (5.07 or 7.05)) or permission of instructor
Units: 4-0-8
Spanning the fields of biology, chemistry, and engineering, this class introduces students to the principles of chemical biology and the application of chemical and physical methods and reagents to the study and manipulation of biological systems. Topics include nucleic acid structure, recognition, and manipulation; protein folding and stability, and proteostasis; bioorthogonal reactions and activity-based protein profiling; chemical genetics and small-molecule inhibitor screening; fluorescent probes for biological analysis and imaging; and unnatural amino acid mutagenesis. The class will also discuss the logic of dynamic post-translational modification reactions with an emphasis on chemical biology approaches for studying complex processes including glycosylation, phosphorylation, and lipidation. Students taking the graduate version are expected to explore the subject in greater depth.
B. Imperiali, R. Raines
7.093 Modern Biostatistics
(); first half of term
(Subject meets with 7.573)
Prereq: 7.03 and 7.05
Units: 2-0-4
Provides a practical introduction to probability and statistics used in modern biology. Topics covered include discrete and continuous probability distributions, statistical modeling, hypothesis testing, independence, conditional probability, multiple test corrections, nonparametric methods, clustering, correlation, linear regression, principal components analysis with applications to high-throughput DNA sequencing, and image data analysis. Homework is in the R programming language, but prior programming experience is not required. Students taking the graduate version are expected to explore the subject in greater depth.
A. Jain, H. Wong
7.094 Modern Computational Biology
(); second half of term
(Subject meets with 7.574)
Prereq: 7.03 and 7.05
Units: 2-0-4
Introduces modern methods in computational biology, focusing on DNA/RNA/protein analysis. Topics include next-generation DNA sequencing and sequencing data analysis, RNA-seq (bulk and single-cell), and protein dynamics. Students taking the graduate version are expected to explore the subject in greater depth.
A. Jain, H. Wong
7.102 Introduction to Molecular Biology Techniques
( )
Prereq: None
Units: 0-5-1
Designed primarily for first-year students with little or no lab experience. Introduces basic methods of experimental molecular biology. Specific experiments vary from year-to-year, but will focus on the identification and characterization of bacteria and bacteriophages from the wild using an array of basic methods in molecular biology and microbiology. Biology GIR or Chemistry GIR recommended. Satisfies 6 units of Institute Laboratory credit. Limited to 16; admittance may be controlled by lottery.
A. Martin
7.11 Biology Teaching
(, ) 
Prereq: None
Units arranged
TBA.
For qualified undergraduate students interested in gaining some experience in teaching. Laboratory, tutorial, or classroom teaching under the supervision of a faculty member. Students selected by interview.
Fall: Staff
Spring: Staff
No required or recommended textbooks
7.19 Communication in Experimental Biology
(, )
Prereq: (7.06 and (5.362, 7.003, or 20.109)) or permission of instructor
Units: 4-4-4
Lecture: TR2-4 (68-121)
Students carry out independent literature research. Journal club discussions are used to help students evaluate and write scientific papers. Instruction and practice in written and oral communication is provided.
Fall: F. Batista, D. Housman
Spring: C. Kaiser
No required or recommended textbooks
7.20[J] Human Physiology
()
(Same subject as HST.540[J])
Prereq: 7.05
Units: 5-0-7
Comprehensive exploration of human physiology, emphasizing the molecular basis and applied aspects of organ function and regulation in health and disease. Includes a review of cell structure and function, as well as the mechanisms by which the endocrine and nervous systems integrate cellular metabolism. Special emphasis on examining the cardiovascular, pulmonary, gastrointestinal, and renal systems, as well as liver function, drug metabolism, and pharmacogenetics.
M. Krieger, O. Yilmaz
7.21 Microbial Physiology
()
(Subject meets with 7.62)
Prereq: 7.03 and 7.05
Units: 4-0-8
Lecture: MW11-1 (56-114) Recitation: F11 (56-114)
Biochemical properties of bacteria and other microorganisms that enable them to grow under a variety of conditions. Interaction between bacteria and bacteriophages. Genetic and metabolic regulation of enzyme action and enzyme formation. Structure and function of components of the bacterial cell envelope. Protein secretion with a special emphasis on its various roles in pathogenesis. Additional topics include bioenergetics, symbiosis, quorum sensing, global responses to DNA damage, and biofilms. Students taking the graduate version are expected to explore the subject in greater depth.
G. C. Walker, A. J. Sinskey
No textbook information available
7.23[J] Immunology
()
(Same subject as 20.230[J])
(Subject meets with 7.63[J], 20.630[J])
Prereq: 7.06
Units: 5-0-7
Comprehensive survey of molecular, genetic, and cellular aspects of the immune system. Topics include innate and adaptive immunity; cells and organs of the immune system; hematopoiesis; immunoglobulin, T cell receptor, and major histocompatibility complex (MHC) proteins and genes; development and functions of B and T lymphocytes; immune responses to infections and tumors; hypersensitivity, autoimmunity, and immunodeficiencies. Particular attention to the development and function of the immune system as a whole, as studied by modern methods and techniques. Students taking graduate version explore the subject in greater depth, including study of recent primary literature.
S.Spranger, M. Birnbaum
7.24 Advanced Concepts in Immunology
()
(Subject meets with 7.84)
Prereq: 7.23
Units: 3-0-9
Provides a comprehensive and intensified understanding of the relevance of the immune system beyond immunity. Focuses on how the immune system intersects with all aspects of body homeostasis/physiology or disease and how the immune system can be manipulated therapeutically. New advances in the intersection of immunology with cancer biology, neurosciences, metabolism, aging, and maternal-fetal immunology or similar explored. Presents new modern methods and techniques applicable beyond immunology. Includes critical analysis and discussion of assigned readings. Students apply principles learned in class to generate a potential research project, presented in a written form. Students taking graduate version complete additional assignments.
H. Moura Silva, S. Spranger
7.26 Molecular Basis of Infectious Disease
()
(Subject meets with 7.66)
Prereq: 7.06
Units: 4-0-8
Focuses on the principles of host-pathogen interactions with an emphasis on infectious diseases of humans. Presents key concepts of pathogenesis through the study of various human pathogens. Includes critical analysis and discussion of assigned readings. Students taking the graduate version are expected to explore the subject in greater depth.
E. Chen, R. Lamason
7.27 Principles of Human Disease and Aging
()
Prereq: 7.06
Units: 4-0-8
Covers modern approaches to human diseases and aging, emphasizing the molecular and cellular basis of genetic diseases, infectious diseases, aging, and cancer. Topics include the genetics of simple and complex traits; karyotypic analysis and positional cloning; genetic diagnosis; evolutionary determination of aging, genetic and molecular aspects of aging, HIV/AIDs and other infectious diseases; the roles of oncogenes and tumor suppressors; the interaction between genetics and environment; animal models of human disease, cancer, and aging; and treatment strategies for diseases and aging. Includes a paper describing novel treatment options for a specific disease chosen by each student.
D. Housman, Y. Soto-Feliciano
7.28 Molecular Biology
()
(Subject meets with 7.58)
Prereq: 7.03; Coreq: 7.05
Units: 5-0-7
Detailed analysis of the biochemical mechanisms that control the maintenance, expression, and evolution of prokaryotic and eukaryotic genomes. Topics covered in lecture and readings of relevant literature include: gene regulation, DNA replication, genetic recombination, and mRNA translation. Logic of experimental design and data analysis emphasized. Presentations include both lectures and group discussions of representative papers from the literature. Students taking the graduate version are expected to explore the subject in greater depth.
E. Calo, Y. Soto-Feliciano
7.29[J] Cellular and Molecular Neurobiology
()
(Same subject as 9.09[J])
Prereq: 7.05 or 9.01
Units: 4-0-8
Introduction to the structure and function of the nervous system. Emphasizes the cellular properties of neurons and other excitable cells. Includes the structure and biophysical properties of excitable cells, synaptic transmission, neurochemistry, neurodevelopment, integration of information in simple systems, and detection and information coding during sensory transduction.
T. Littleton, S. Prescott
7.30[J] Fundamentals of Ecology
()
(Same subject as 1.018[J], 12.031[J])
Prereq: None
Units: 4-0-8
Lecture: TR1.30-3 (35-225) Recitation: M4 (48-316) or R4 (48-308) +final
Fundamentals of ecology, considering Earth as an integrated dynamic living system. Coevolution of the biosphere and geosphere, biogeochemical cycles, metabolic diversity, primary productivity, competition and the niche, trophic dynamics and food webs, population growth and limiting factors. Population modeling, global carbon cycle, climate change, geoengineering, theories of resource competition and mutualism, allometric scaling, ecological genomics, niche theory, human population growth. Applied ecology.
O. Cordero, D. McRose, C. Terrer
No textbook information available
7.31 Current Topics in Mammalian Biology: Medical Implications
()
Prereq: 7.06 or permission of instructor
Units: 4-0-8
Covers recent advances in mammalian cell and developmental biology with particular emphasis on approaches that utilize mouse genetics. Combines formal lectures on selected topics with readings of original papers which are discussed in class. Major emphasis on the implications of mechanisms of human genetic diseases. Topics include early mammalian development; genomic imprinting; X inactivation; embryonic stem cells; nuclear reprogramming of somatic cells; cell migration; nervous system development; and central nervous system degenerative diseases such as Alzheimer's and Huntington's disease. Limited to 20.
F. Gertler, R. Jaenisch
7.32 Systems Biology
()
(Subject meets with 7.81[J], 8.591[J])
Prereq: (18.03 and 18.05) or permission of instructor
Units: 3-0-9
Lecture: TR1-2.30 (4-159) Recitation: W EVE (4.30-6 PM) (2-147) +final
Introduction to cellular and population-level systems biology with an emphasis on synthetic biology, modeling of genetic networks, cell-cell interactions, and evolutionary dynamics. Cellular systems include genetic switches and oscillators, network motifs, genetic network evolution, and cellular decision-making. Population-level systems include models of pattern formation, cell-cell communications, and evolutionary systems biology. Students taking graduate version explore the subject in more depth.
J. Gore
Textbooks (Fall 2024)
7.33[J] Evolutionary Biology: Concepts, Models and Computation
()
(Same subject as 6.4710[J])
Prereq: (6.100A and 7.03) or permission of instructor
Units: 3-0-9
Explores and illustrates how evolution explains biology, with an emphasis on computational model building for analyzing evolutionary data. Covers key concepts of biological evolution, including adaptive evolution, neutral evolution, evolution of sex, genomic conflict, speciation, phylogeny and comparative methods, life's history, coevolution, human evolution, and evolution of disease.
R. Berwick, D. Bartel
7.340-7.344 Advanced Undergraduate Seminar
(, )
Prereq: 7.06 or 7.28
Units: 2-0-4 [P/D/F]
URL: 7.340: https://biology.mit.edu/undergraduate/current-students/subject-offerings/advanced-undergraduate-seminars/
7.340: TBA.
7.341: TBA.
7.342: TBA.
7.343: TBA.
7.344: TBA.
Seminars covering topics of current interest in biology with a focus on how to understand experimental methods and design and how to critically read the primary research literature. Small class size facilitates discussions and interactions with an active research scientist. Students visit research laboratories to see firsthand how biological research is conducted. Contact Biology Education Office for topics.
Fall: H. R. Horvitz
Spring: H. R. Horvitz
7.340: No required or recommended textbooks
7.341: No required or recommended textbooks
7.342: No required or recommended textbooks
7.343: No required or recommended textbooks
7.344: No required or recommended textbooks
7.345-7.349 Advanced Undergraduate Seminar
(, )
Prereq: 7.06 or 7.28
Units: 2-0-4 [P/D/F]
URL: 7.345: https://biology.mit.edu/undergraduate/current-students/subject-offerings/advanced-undergraduate-seminars/
7.345: TBA.
7.346: TBA.
7.347: TBA.
7.348: TBA.
7.349: TBA.
Seminars covering topics of current interest in biology with a focus on how to understand experimental methods and design and how to critically read the primary research literature. Small class size facilitates discussions and interactions with an active research scientist. Students visit research laboratories to see firsthand how biological research is conducted. Contact Biology Education Office for topics.
Fall: H. R. Horvitz
Spring: H. R. Horvitz
7.345: No required or recommended textbooks
7.346: No required or recommended textbooks
7.347: No required or recommended textbooks
7.348: No required or recommended textbooks
7.349: No required or recommended textbooks
7.35 Human Genetics and Genomics
()
(Subject meets with 7.75)
Prereq: 7.06, (7.03 and 7.05), or permission of instructor
Units: 3-0-9
Upper-level seminar offering in-depth analysis and engaged discussion of primary literature on the dimensions and phenotypic consequences of variation in human genes, chromosomes, and genomes. Topics include the human genome project; pedigree analysis; mutation and selection; linkage and association studies; medical genetics and disease; sex chromosomes and sex differences; the biology of the germ line; epigenetics, imprinting, and transgenerational inheritance; human origins; and evolutionary and population genetics. Students taking graduate version complete additional assignments. Limited to 20 total for versions meeting together.
D. Page
7.36 The CRISPR Revolution: Engineering the Genome for Basic Science and Clinical Medicine
(New)
()
(Subject meets with 7.91)
Prereq: 7.06 or permission of instructor
Units: 3-0-9
TBA.
Provides a conceptual and technical understanding of genome editing systems and their research and clinical applications. Focuses on fundamental CRISPR biology in bacteria, methodologies for manipulating the genome with CRISPR, and the application of genome engineering in research and medicine. Combines lectures and literature discussions with critical analysis and assigned readings, with the goal of better understanding how key discoveries were made and how these are applied in the real work. Class work includes brief writing assignments as well as a final research proposal and scientific presentation. Students taking the graduate version explore the subject in greater depth, in part through additional assignments.
F. Sánchez-Rivera, J. Weissman
No textbook information available
7.37[J] Molecular and Engineering Aspects of Biotechnology
()
(Same subject as 10.441[J], 20.361[J])
Prereq: (7.06 and (2.005, 3.012, 5.60, or 20.110)) or permission of instructor
Units: 4-0-8
Credit cannot also be received for 7.371
Covers biological and bioengineering principles underlying the development and therapeutic use of recombinant proteins and stem cells; glycoengineering of recombinant proteins; normal and pathological signaling by growth factors and their receptors; receptor trafficking; monoclonal antibodies as therapeutics; protein pharmacology and delivery; stem cell-derived tissues as therapeutics; RNA therapeutics; combinatorial protein engineering; and new antitumor drugs.
Staff
7.371 Biological and Engineering Principles Underlying Novel Biotherapeutics
()
Prereq: 7.06
Units: 4-0-8
Credit cannot also be received for 7.37, 10.441, 20.361
Lecture: MW3-5 (Whitehead-7TH)
Covers biological and bioengineering principles underlying the development and therapeutic use of recombinant proteins and immune cells. Special attention to monoclonal antibodies and engineered immune system cells as therapeutics; protein- and glyco- engineering to enhance protein function; protein pharmacology and delivery; nucleic acid- based biotherapeutics; generation of functional cells and tissues from embryonic stem cells and iPS cells; and immune cell-cancer cell interactions in cancer immunotherapy.
J. Chen, H. Lodish
Textbooks (Fall 2024)
7.38 Design Principles of Biological Systems
()
(Subject meets with 7.83)
Prereq: 7.06 or permission of instructor
Units: 3-0-9
TBA.
Introduces students to biological control mechanisms governing decision-making and tools to decipher, model, and perturb these mechanisms. Systems presented include signal transduction, cell cycle control, developmental biology, and the immune system. These systems provide examples of feedback and feedforward control, oscillators, kinetic proofreading, spatial and temporal averaging, and pattern formation. Students taking graduate version complete additional assignments.
D. Lew, H. Wong
No textbook information available
7.45 The Hallmarks of Cancer
()
(Subject meets with 7.85)
Prereq: None. Coreq: 7.06
Units: 4-0-8
Lecture: TR1-2.30 (32-155) Recitation: R EVE (7 PM) (26-314) or F11 (26-314) or F12 (26-314)
Provides a comprehensive introduction to the fundamentals of cancer biology and cancer treatment. Topics include cancer genetics, genomics, and epigenetics; familial cancer syndromes; signal transduction, cell cycle control, and apoptosis; cancer metabolism; stem cells and cancer; metastasis; cancer immunology and immunotherapy; conventional and molecularly-targeted therapies; and early detection and prevention. Students taking graduate version complete additional assignments.
M. Hemann, T. Jacks
Textbooks (Fall 2024)
7.46 Building with Cells
()
(Subject meets with 7.86)
Prereq: 7.03 and 7.05
Units: 4-0-8
Lecture: MW11-12.30 (26-328)
Focuses on fundamental principles of developmental biology by which cells build organs and organisms. Analyzes the pivotal role of stem cells in tissue maintenance or repair, and in treatment of disease. Explores how to integrate this knowledge with engineering tools to construct functional tissue structures. Students taking graduate version complete additional assignments
L. Boyer, P. Li
Textbooks (Fall 2024)
7.458[J] Advances in Biomanufacturing
(); second half of term
(Same subject as 10.03[J])
(Subject meets with 7.548[J], 10.53[J])
Prereq: None
Units: 1-0-2 [P/D/F]
Seminar examines how biopharmaceuticals, an increasingly important class of pharmaceuticals, are manufactured. Topics range from fundamental bioprocesses to new technologies to the economics of biomanufacturing. Also covers the impact of globalization on regulation and quality approaches as well as supply chain integrity. Students taking graduate version complete additional assignments.
A. Sinskey, S. Springs
7.49[J] Developmental Neurobiology
()
(Same subject as 9.18[J])
(Subject meets with 7.69[J], 9.181[J])
Prereq: 7.03, 7.05, 9.01, or permission of instructor
Units: 3-0-9
Considers molecular control of neural specification, formation of neuronal connections, construction of neural systems, and the contributions of experience to shaping brain structure and function. Topics include: neural induction and pattern formation, cell lineage and fate determination, neuronal migration, axon guidance, synapse formation and stabilization, activity-dependent development and critical periods, development of behavior. Students taking graduate version complete additional readings that will be addressed in their mid-term and final exams.
Staff
7.390 Practical Internship Experience in Biology
(, , ,  )
Prereq: None
Units: 0-1-0 [P/D/F]
TBA.
For Course 7, 5-7, and 6-7 students participating in curriculum-related off-campus internship experiences in biology. Before enrolling, students must consult the Biology Education Office for details on procedures and restrictions, and have approval from their faculty advisor. Subject to department approval. Upon completion, the student must submit a write-up of the experience, approved by their faculty advisor.
Fall: Staff
IAP: Staff
Spring: Staff
Summer: Staff
No required or recommended textbooks
7.391 Independent Study in Biology
 (, , )
Prereq: None
Units arranged [P/D/F]
TBA.
Program of study or research to be arranged with a department faculty member.
Fall: Staff
Spring: Staff
Summer: Staff
No required or recommended textbooks
7.392 Independent Study in Biology
(, , )
Prereq: None
Units arranged
TBA.
Program of study or research to be arranged with a department faculty member.
Fall: Staff
IAP: Staff
Spring: Staff
No required or recommended textbooks
7.393 Independent Study in Genetics
(, )
Prereq: None
Units arranged
TBA.
Program of study or research to be arranged with a department faculty member.
Fall: Staff
Spring: Staff
No required or recommended textbooks
7.394 Independent Study in Biochemistry
(, )
Prereq: None
Units arranged
TBA.
Program of study or research to be arranged with a department faculty member.
Fall: Staff
Spring: Staff
No required or recommended textbooks
7.395 Independent Study in Cell and Molecular Biology
(, )
Prereq: None
Units arranged
TBA.
Program of study or research to be arranged with a department faculty member.
Fall: Staff
Spring: Staff
No required or recommended textbooks
7.396 Independent Study in Experimental Biology
(, , )
Prereq: None
Units arranged [P/D/F]
TBA.
Program of study or research to be arranged with a department faculty member.
Fall: Staff
IAP: Staff
Spring: Staff
No required or recommended textbooks
7.C01 Machine Learning in Molecular and Cellular Biology
()
(Subject meets with 3.C01[J], 3.C51[J], 7.C51, 10.C01[J], 10.C51[J], 20.C01[J], 20.C51[J])
Prereq: Biology (GIR), 6.100A, and 7.05; Coreq: 6.C01
Units: 2-0-4
Credit cannot also be received for 1.C01, 1.C51, 2.C01, 2.C51, 3.C01, 3.C51, 7.C51, 10.C01, 10.C51, 20.C01, 20.C51, 22.C01, 22.C51, SCM.C51
Introduces machine learning as a tool to understand natural biological systems, with an evolving emphasis on problems in molecular and cellular biology that are being actively advanced using machine learning. Students design, implement, and interpret machine learning approaches to aid in predicting protein structure, probing protein structure/function relationships, and imaging biological systems at scales ranging from the atomic to cellular. Students taking graduate version complete an additional project-based assignment. Students cannot receive credit without simultaneous completion of 6.C01.
C. Coley, J. Davis, E. Fraenkel, R. Gomez-Bombarelli
7.S391 Special Subject in Biology
(, , , )
Prereq: Permission of instructor
Units arranged [P/D/F]
TBA.
Covers material in various fields of biology not offered by the regular subjects of instruction.
Fall: Staff
IAP: Staff
Spring: Staff
Summer: Staff
No required or recommended textbooks
7.S392 Special Subject in Biology
(, , )
Not offered regularly; consult department
Prereq: Permission of instructor
Units arranged [P/D/F]
Covers material in various fields of biology not offered by the regular subjects of instruction.
Staff
7.S399 Special Subject in Biology
(, , )
Not offered regularly; consult department
Prereq: Permission of instructor
Units arranged
Covers material in various fields of biology not offered by the regular subjects of instruction.
Fall: Staff
IAP: Staff
Spring: Staff
7.UR Undergraduate Research
(, , , )
Prereq: Permission of department
Units arranged [P/D/F]
TBA.
Undergraduate research opportunities in the Department of Biology.
Fall: Staff
IAP: Staff
Spring: Staff
Summer: Staff
No required or recommended textbooks
7.URG Undergraduate Research
(, , )
Prereq: Permission of department
Units arranged
TBA.
Undergraduate research opportunities in the Department of Biology.
Fall: Staff
IAP: Staff
Spring: Staff
No required or recommended textbooks
Graduate Subjects
MIT-WHOI Joint Program in Oceanography
7.410 Applied Statistics
 ()
Prereq: Permission of instructor
Units: 3-0-9
Provides an introduction to modern applied statistics. Topics include likelihood-based methods for estimation, confidence intervals, and hypothesis-testing; bootstrapping; time series modeling; linear models; nonparametric regression; and model selection. Organized around examples drawn from the recent literature.
WHOI Staff
7.411 Seminars in Biological Oceanography
(, )
Prereq: Permission of instructor
Units arranged [P/D/F]
Meets at WHOI. TBA.
Selected topics in biological oceanography.
Fall: WHOI Staff
Spring: WHOI Staff
No textbook information available
7.421 Problems in Biological Oceanography
(, )
Prereq: Permission of instructor
Units arranged [P/D/F]
Meets at WHOI. TBA.
Advanced problems in biological oceanography with assigned reading and consultation.
Fall: Information: M. Neubert (WHOI)
Spring: Information: M. Neubert (WHOI)
No textbook information available
7.430 Topics in Quantitative Marine Science
(, )
Prereq: Permission of instructor
Units: 2-0-4
Lectures and discussions on quantitative marine ecology. Topics vary from year to year.
WHOI Staff
7.431 Topics in Marine Ecology
(, )
Prereq: Permission of instructor
Units: 2-0-4
TBA.
Lectures and discussions on ecological principles and processes in marine populations, communities, and ecosystems. Topics vary from year to year.
Fall: WHOI Staff
Spring: WHOI Staff
No textbook information available
7.432 Topics in Marine Physiology and Biochemistry
()
Prereq: Permission of instructor
Units: 2-0-4
Lectures and discussions on physiological and biochemical processes in marine organisms. Topics vary from year to year.
WHOI Staff
7.433 Topics in Biological Oceanography
(, )
Prereq: Permission of instructor
Units: 2-0-4
Meets at WHOI. TBA.
Lectures and discussions on biological oceanography. Topics vary from year to year.
Fall: WHOI Staff
Spring: S. Beaulieu
No textbook information available
7.434 Topics in Zooplankton Biology
(, )
Prereq: Permission of instructor
Units: 2-0-4
Meets at WHOI. TBA.
Lectures and discussions on the biology of marine zooplankton. Topics vary from year to year.
Fall: WHOI Staff
Spring: WHOI Staff
No textbook information available
7.435 Topics in Benthic Biology
(, )
Prereq: Permission of instructor
Units: 2-0-4
Meets at WHOI. TBA.
Lectures and discussions on the biology of marine benthos. Topics vary from year to year.
Fall: WHOI Staff
Spring: WHOI Staff
No textbook information available
7.436 Topics in Phytoplankton Biology
(, )
Prereq: Permission of instructor
Units: 2-0-4
Meets at WHOI. TBA.
Lectures and discussion on the biology of marine phytoplankton. Topics vary from year to year.
Fall: WHOI Staff
Spring: WHOI Staff
No textbook information available
7.437 Topics in Molecular Biological Oceanography
(, )
Prereq: Permission of instructor
Units: 2-0-4
Meets at WHOI. TBA.
Lectures and discussion on molecular biological oceanography. Topics vary from year to year.
Fall: WHOI Staff
Spring: WHOI Staff
No textbook information available
7.438 Topics in the Behavior of Marine Animals
(, )
Prereq: Permission of instructor
Units: 2-0-4
Meets at WHOI. TBA.
Lectures and discussion on the behavioral biology of marine animals. Topics vary from year to year.
Fall: WHOI Staff
Spring: WHOI Staff
No textbook information available
7.439 Topics in Marine Microbiology
()
Prereq: Permission of instructor
Units: 2-0-4
Lectures and discussion on the biology of marine prokaryotes. Topics vary from year to year.
WHOI Staff
7.440 An Introduction to Mathematical Ecology
()
Prereq: Calculus I (GIR), 1.018, or permission of instructor
Units: 3-0-9
Covers the basic models of population growth, demography, population interaction (competition, predation, mutualism), food webs, harvesting, and infectious disease, and the mathematical tools required for their analysis. Because these tools are also basic to the analysis of models in biochemistry, physiology, and behavior, subject also broadly relevant to students whose interests are not limited to ecological problems.
M. Neubert
7.470 Biological Oceanography
()
Prereq: Permission of instructor
Units: 3-0-9
Intended for students with advanced training in biology. Intensive overview of biological oceanography. Major paradigms discussed, and dependence of biological processes in the ocean on physical and chemical aspects of the environment examined. Surveys the diversity of marine habitats, major groups of taxa inhabiting those habitats, and the general biology of the various taxa: the production and consumption of organic material in the ocean, as well as factors controlling those processes. Species diversity, structure of marine food webs, and the flow of energy within different marine habitats are detailed and contrasted.
M. Pachiadaki, J. Pineda
7.491 Research in Biological Oceanography
(, , )
Prereq: Permission of instructor
Units arranged [P/D/F]
Meets at WHOI. TBA.
Directed research in biological oceanography not leading to graduate thesis and initiated prior to the qualifying exam.
Fall: WHOI Staff
Spring: WHOI Staff
Summer: WHOI Staff
No required or recommended textbooks (Summer 2024); No textbook information available (Fall 2024)
Microbiology (MICRO)
7.492[J] Methods and Problems in Microbiology
()
(Same subject as 1.86[J], 20.445[J])
Prereq: None
Units: 3-0-9
Lecture: W12.30-3 (68-150)
Students will read and discuss primary literature covering key areas of microbial research with emphasis on methods and approaches used to understand and manipulate microbes. Preference to first-year Microbiology and Biology students.
M. Laub, Staff
No required or recommended textbooks
7.493[J] Microbial Genetics and Evolution
()
(Same subject as 1.87[J], 12.493[J], 20.446[J])
Prereq: 7.03, 7.05, or permission of instructor
Units: 4-0-8
Lecture: TR12.30-2.30 (66-160) Recitation: F11 (2-142)
Covers aspects of microbial genetic and genomic analyses, central dogma, horizontal gene transfer, and evolution.
A. Grossman, O. Cordero
No required or recommended textbooks
7.494 Research Problems in Microbiology
(, , )
Prereq: Permission of instructor
Units arranged [P/D/F]
TBA.
Directed research in the fields of microbial science and engineering.
Fall: Staff
Spring: Staff
Summer: Staff
No required or recommended textbooks
7.498 Teaching Experience in Microbiology
(, )
Prereq: Permission of instructor
Units arranged [P/D/F]
TBA.
For qualified graduate students in the Microbiology graduate program interested in teaching. Classroom or laboratory teaching under the supervision of a faculty member.
Fall: Staff
Spring: Staff
No required or recommended textbooks
7.499 Research Rotations in Microbiology
(, )
Prereq: None. Coreq: 7.492 or 7.493; permission of instructor
Units arranged [P/D/F]
TBA.
Introduces students to faculty participating in the interdepartmental Microbiology graduate program through a series of three lab rotations, which provide broad exposure to microbiology research at MIT. Students select a lab for thesis research by the end of their first year. Given the interdisciplinary nature of the program and the many research programs available, students may be able to work jointly with more than one research advisor. Limited to students in the Microbiology graduate program.
Fall: Staff
Spring: Staff
No required or recommended textbooks
7.MTHG Microbiology Graduate Thesis
(, , , )
Prereq: Permission of instructor
Units arranged
TBA.
Program of research leading to the writing of a PhD thesis. To be arranged by the student and the appropriate MIT faculty member.
Fall: Staff
IAP: Staff
Spring: Staff
Summer: Staff
No required or recommended textbooks
Biology
7.50 Method and Logic in Molecular Biology
()
Prereq: None. Coreq: 7.51 and 7.52; or permission of instructor
Units: 4-0-8
Recitation: M EVE (3-6 PM),R2.30-5.30 (Whitehead-4TH, 68-156, Whitehead-6TH)
Logic, experimental design and methods in biology, using discussions of the primary literature to discern the principles of biological investigation in making discoveries and testing hypotheses. In collaboration with faculty, students also apply those principles to generate a potential research project, presented in both written and oral form. Limited to Course 7 graduate students.
I. Cheeseman, R. Lehmann, D. Lew, S. Vos, J. Weissman, Y. Yamashita
No required or recommended textbooks
7.51 Principles of Biochemical Analysis
()
Prereq: Permission of instructor
Units: 6-0-6
F1 meets in 2-105. Lecture: MWF9-10.30 (56-114) Recitation: T2.30,F1 (56-114)
Principles of protein biochemistry, emphasizing structure, equilibrium studies, kinetics, and experimental design. Topics include macromolecular binding and specificity, allosteric systems, mechanisms of inhibition, enzyme principles, single-molecule studies, structure-function relationships, molecular evolution, and library methods. Case studies examine mechanisms of transcription factors, kinases, molecular machines, and other proteins.
L. Case, A. Keating
No required or recommended textbooks
7.52 Genetics for Graduate Students
()
Prereq: Permission of instructor
Units: 4-0-8
Lecture: TR9.30-11.30 (56-154) Recitation: W3.30,F2 (66-144)
Principles and approaches of genetic analysis, including Mendelian inheritance and prokaryotic genetics, yeast genetics, developmental genetics, neurogenetics, and human genetics.
C. Kaiser
No required or recommended textbooks
7.540[J] Advances in Chemical Biology
()
(Same subject as 5.54[J], 20.554[J])
Prereq: 5.07, 5.13, 7.06, and permission of instructor
Units: 3-0-9
Lecture: TR9-10.30 (4-261)
Introduction to current research at the interface of chemistry, biology, and bioengineering. Topics include imaging of biological processes, metabolic pathway engineering, protein engineering, mechanisms of DNA damage, RNA structure and function, macromolecular machines, protein misfolding and disease, metabolomics, and methods for analyzing signaling network dynamics. Lectures are interspersed with class discussions and student presentations based on current literature.
L. Kiessling, O. Johnson
No textbook information available
7.546[J] Science and Business of Biotechnology
()
(Same subject as 15.480[J], 20.586[J])
Prereq: None. Coreq: 15.401; permission of instructor
Units: 3-0-6
Covers the new types of drugs and other therapeutics in current practice and under development, the financing and business structures of early-stage biotechnology companies, and the evaluation of their risk/reward profiles. Includes a series of live case studies with industry leaders of both established and emerging biotechnology companies as guest speakers, focusing on the underlying science and engineering as well as core financing and business issues. Students must possess a basic background in cellular and molecular biology.
J. Chen, A. Koehler, A. Lo, H. Lodish
7.548[J] Advances in Biomanufacturing
(); second half of term
(Same subject as 10.53[J])
(Subject meets with 7.458[J], 10.03[J])
Prereq: None
Units: 1-0-2
Seminar examines how biopharmaceuticals, an increasingly important class of pharmaceuticals, are manufactured. Topics range from fundamental bioprocesses to new technologies to the economics of biomanufacturing. Also covers the impact of globalization on regulation and quality approaches as well as supply chain integrity. Students taking graduate version complete additional assignments.
A. Sinskey, S. Springs
7.549[J] Case Studies and Strategies in Drug Discovery and Development
()
Not offered regularly; consult department
(Same subject as 15.137[J], 20.486[J], HST.916[J])
Prereq: None
Units: 2-0-4
Aims to develop appreciation for the stages of drug discovery and development, from target identification, to the submission of preclinical and clinical data to regulatory authorities for marketing approval. Following introductory lectures on the process of drug development, students working in small teams analyze how one of four new drugs or drug candidates traversed the discovery/development landscape. For each case, an outside expert from the sponsoring drug company or pivotal clinical trial principal investigator provides guidance and critiques the teams' presentations to the class.
A. W. Wood
7.55 Case Studies in Modern Experimental Design
()
Prereq: Permission of instructor
Units: 2-0-7
Focuses on enhancing students' ability to analyze, design and present experiments, emphasizing modern techniques. Class discussions begin with papers that developed or utilized contemporary approaches (e.g., quantitative microscopy, biophysical and molecular genetic methods) to address important problems in biology. Each student prepares one specific aim of a standard research proposal for a project that emphasizes research strategy, experimental design, and writing.
L. Guarente, A. Ringel
7.571 Quantitative Analysis of Biological Data
(); first half of term
Prereq: None
Units: 2-0-4
Application of probability theory and statistical methods to analyze biological data. Topics include: descriptive and inferential statistics, an introduction to Bayesian statistics, design of quantitative experiments, and methods to analyze high-dimensional datasets. A <em>conceptual</em> understanding of topics is emphasized, and methods are illustrated using the Python programming language. Although a basic understanding of Python is encouraged, no programming experience is required. Students taking the graduate version are expected to explore the subject in greater depth.
J. Davis
7.572 Quantitative Measurements and Modeling of Biological Systems
(); second half of term
Prereq: None
Units: 2-0-4
Quantitative experimental design, data analysis, and modeling for biological systems. Topics include absolute/relative quantification, noise and reproducibility, regression and correlation, and modeling of population growth, gene expression, cellular dynamics, feedback regulation, oscillation. Students taking the graduate version are expected to explore the subject in greater depth.
G.W. Li
7.573 Modern Biostatistics
(); first half of term
(Subject meets with 7.093)
Prereq: 7.03 and 7.05
Units: 2-0-4
Provides a practical introduction to probability and statistics used in modern biology. Topics covered include discrete and continuous probability distributions, statistical modeling, hypothesis testing, independence, conditional probability, multiple test corrections, nonparametric methods, clustering, correlation, linear regression, principal components analysis with applications to high-throughput DNA sequencing and image data analysis. Homework is in the R programming language, but prior programming experience is not required. Students taking the graduate version are expected to explore the subject in greater depth.
A. Jain, H. Wong
7.574 Modern Computational Biology
(); second half of term
(Subject meets with 7.094)
Prereq: 7.03 and 7.05
Units: 2-0-4
Introduces modern methods in computational biology, focusing on DNA/RNA/protein analysis. Topics include next-generation DNA sequencing and sequencing data analysis, RNA-seq (bulk and single-cell), and protein dynamics. Students taking the graduate version are expected to explore the subject in greater depth.
A, Jain, H. Wong
7.58 Molecular Biology
()
(Subject meets with 7.28)
Prereq: 7.03, 7.05, and permission of instructor
Units: 5-0-7
Detailed analysis of the biochemical mechanisms that control the maintenance, expression, and evolution of prokaryotic and eukaryotic genomes. Topics covered in lecture and readings of relevant literature include: gene regulation, DNA replication, genetic recombination, and mRNA translation. Logic of experimental design and data analysis emphasized. Presentations include both lectures and group discussions of representative papers from the literature. Students taking the graduate version are expected to explore the subject in greater depth.
E. Calo, Y. Soto-Feliciano
7.59[J] Teaching College-Level Science and Engineering
()
(Same subject as 1.95[J], 5.95[J], 8.395[J], 18.094[J])
(Subject meets with 2.978)
Prereq: None
Units: 2-0-2 [P/D/F]
TBA.
Participatory seminar focuses on the knowledge and skills necessary for teaching science and engineering in higher education. Topics include theories of adult learning; course development; promoting active learning, problemsolving, and critical thinking in students; communicating with a diverse student body; using educational technology to further learning; lecturing; creating effective tests and assignments; and assessment and evaluation. Students research and present a relevant topic of particular interest. Appropriate for both novices and those with teaching experience.
J. Rankin
No textbook information available
7.60 Cell Biology: Structure and Functions of the Nucleus
()
Prereq: 7.06 or permission of instructor
Units: 3-0-9
Eukaryotic genome structure, function, and expression, processing of RNA, and regulation of the cell cycle. Emphasis on the techniques and logic used to address important problems in nuclear cell biology. Lectures on broad topic areas in nuclear cell biology and discussions on representative recent papers.
L. Boyer, R. Young
7.61[J] Eukaryotic Cell Biology: Principles and Practice
()
(Same subject as 20.561[J])
Prereq: Permission of instructor
Units: 4-0-8
Emphasizes methods and logic used to analyze structure and function of eukaryotic cells in diverse systems (e.g., yeast, fly, worm, mouse, human; development, stem cells, neurons). Combines lectures and in-depth roundtable discussions of literature readings with the active participation of faculty experts. Focuses on membranes (structure, function, traffic), organelles, the cell surface, signal transduction, cytoskeleton, cell motility and extracellular matrix. Ranges from basic studies to applications to human disease, while stressing critical analysis of experimental approaches. Enrollment limited.
M. Krieger, M. Yaffe
7.62 Microbial Physiology
()
(Subject meets with 7.21)
Prereq: 7.03, 7.05, and permission of instructor
Units: 4-0-8
Lecture: MW11-1 (56-114) Recitation: F11 (56-114)
Biochemical properties of bacteria and other microorganisms that enable them to grow under a variety of conditions. Interaction between bacteria and bacteriophages. Genetic and metabolic regulation of enzyme action and enzyme formation. Structure and function of components of the bacterial cell envelope. Protein secretion with a special emphasis on its various roles in pathogenesis. Additional topics include bioenergetics, symbiosis, quorum sensing, global responses to DNA damage, and biofilms. Students taking the graduate version are expected to explore the subject in greater depth.
G. C. Walker, A. J. Sinskey
No textbook information available
7.63[J] Immunology
()
(Same subject as 20.630[J])
(Subject meets with 7.23[J], 20.230[J])
Prereq: 7.06 and permission of instructor
Units: 5-0-7
Comprehensive survey of molecular, genetic, and cellular aspects of the immune system. Topics include innate and adaptive immunity; cells and organs of the immune system; hematopoiesis; immunoglobulin, T cell receptor, and major histocompatibility complex (MHC) proteins and genes; development and functions of B and T lymphocytes; immune responses to infections and tumors; hypersensitivity, autoimmunity, and immunodeficiencies. Particular attention to the development and function of the immune system as a whole, as studied by modern methods and techniques. Students taking graduate version explore the subject in greater depth, including study of recent primary literature.
S. Spranger, M. Birnbaum
7.64 Molecular Mechanisms, Pathology and Therapy of Human Neuromuscular Disorders
()
Prereq: Permission of instructor
Units: 3-0-9
Investigates the molecular and clinical basis of central nervous system and neuromuscular disorders with particular emphasis on strategies for therapeutic intervention. Considers the in-depth analysis of clinical features, pathological mechanisms, and responses to current therapeutic interventions. Covers neurodegenerative diseases, such as Huntington's disease, Parkinson's disease, Alzheimer's disease, Amyotropic Lateral Schlerosis, Frontal Temporal Dementia, and neuromuscular disorders, such as Myotonic Dystrophy, Facio Scapular Humoral Dystrophy, and Duchenne Muscular Dystrophy.
D. Housman
7.65[J] Molecular and Cellular Neuroscience Core I
()
(Same subject as 9.015[J])
Prereq: None
Units: 3-0-9
Lecture: TR1-2.30 (46-4062)
Survey and primary literature review of selected major topic areas in molecular and cellular neurobiology. Covers nervous system development, axonal pathfinding, synapse formation and function, synaptic plasticity, ion channels and receptors, cellular neurophysiology, glial cells, sensory transduction, and relevant examples in human disease. Includes lectures and weekly paper write-ups, together with student presentations and discussion of primary literature. A final two-page research write-up is also due at the end of the term.
J. T. Littleton, M. Sheng
No required or recommended textbooks
7.66 Molecular Basis of Infectious Disease
()
(Subject meets with 7.26)
Prereq: 7.06 and permission of instructor
Units: 4-0-8
Focuses on the principles of host-pathogen interactions with an emphasis on infectious diseases of humans. Presents key concepts of pathogenesis through the study of various human pathogens. Includes critical analysis and discussion of assigned readings. Students taking the graduate version are expected to explore the subject in greater depth.
E. Chen, R. Lamason
7.68[J] Molecular and Cellular Neuroscience Core II
()
Not offered regularly; consult department
(Same subject as 9.013[J])
Prereq: Permission of instructor
Units: 3-0-9
Survey and primary literature review of major areas in molecular and cellular neurobiology. Covers genetic neurotrophin signaling, adult neurogenesis, G-protein coupled receptor signaling, glia function, epigenetics, neuronal and homeostatic plasticity, neuromodulators of circuit function, and neurological/psychiatric disease mechanisms. Includes lectures and exams, and involves presentation and discussion of primary literature. 9.015 recommended, though the core subjects can be taken in any sequence.
Staff
7.69[J] Developmental Neurobiology
()
(Same subject as 9.181[J])
(Subject meets with 7.49[J], 9.18[J])
Prereq: 9.011 or permission of instructor
Units: 3-0-9
Considers molecular control of neural specification, formation of neuronal connections, construction of neural systems, and the contributions of experience to shaping brain structure and function. Topics include: neural induction and pattern formation, cell lineage and fate determination, neuronal migration, axon guidance, synapse formation and stabilization, activity-dependent development and critical periods, development of behavior. In addition to final exam, analysis and presentation of research papers required for final grade. Students taking graduate version complete additional assignments. Students taking graduate version complete additional readings that will be addressed in their mid-term and final exams.
Staff
7.70 Regulation of Gene Expression
()
Prereq: Permission of instructor
Units: 4-0-8
Seminar examines basic principles of biological regulation of gene expression. Focuses on examples that underpin these principles, as well as those that challenge certain long-held views. Topics covered may include the role of transcription factors, enhancers, DNA modifications, non-coding RNAs, and chromatin structure in the regulation of gene expression and mechanisms for epigenetic inheritance of transcriptional states. Limited to 40.
Staff
7.71 Biophysical Technique
()
(Subject meets with 5.78)
Prereq: 5.13, 5.60, (5.07 or 7.05), and permission of instructor
Units: 5-0-7
Introduces students to modern biophysical methods to study biological systems from atomic, to molecular and cellular scales. Includes an in-depth discussion on the techniques that cover the full resolution range, including X-ray crystallography, electron-, and light microscopy. Discusses other common biophysical techniques for macromolecular characterizations. Lectures cover theoretical principles behind the techniques, and students are given practical laboratory exercises using instrumentation available at MIT. Meets with 5.78 when offered concurrently.
C. Drennan, T. Schwartz
7.72 Stem Cells, Regeneration, and Development
()
Prereq: Permission of instructor
Units: 4-0-8
Topics include diverse stem cells, such as muscle, intestine, skin, hair and hematopoietic stem cells, as well as pluripotent stem cells. Topics address cell polarity and cell fate; positional information and patterning of development and regeneration; limb, heart and whole body regeneration; stem cell renewal; progenitor cells in development; responses to wounding; and applications of stem cells in development of therapies. Discussions of papers supplement lectures.
R. Jaenisch, P. Reddien
7.73 Principles of Chemical Biology
()
Prereq: 7.05 and permission of instructor
Units: 3-0-9
Spanning the fields of biology, chemistry and engineering, class addresses the principles of chemical biology and its application of chemical and physical methods and reagents to the study and manipulation of biological systems. Topics include bioorthogonal reactions and activity-based protein profiling, small molecule inhibitors and chemical genetics, fluorescent probes for biological studies, and unnatural amino acid mutagenesis. Also covers chemical biology approaches for studying dynamic post-translational modification reactions, natural product biosynthesis and mutasynthesis, and high-throughput drug screening. Students taking the graduate version are expected to explore the subject in greater depth.
B. Imperiali, J. K. Weng
7.74[J] Topics in Biophysics and Physical Biology
()
(Same subject as 8.590[J], 20.416[J])
Prereq: None
Units: 2-0-4 [P/D/F]
Provides broad exposure to research in biophysics and physical biology, with emphasis on the critical evaluation of scientific literature. Weekly meetings include in-depth discussion of scientific literature led by distinct faculty on active research topics. Each session also includes brief discussion of non-research topics including effective presentation skills, writing papers and fellowship proposals, choosing scientific and technical research topics, time management, and scientific ethics.
J. Gore, N. Fakhri
7.75 Human Genetics and Genomics
()
(Subject meets with 7.35)
Prereq: 7.52 or permission of instructor
Units: 3-0-9
Upper level seminar offering in-depth analysis and engaged discussion of primary literature on the dimensions and phenotypic consequences of variation in human genes, chromosomes, and genomes. Topics include the human genome project; pedigree analysis; mutation and selection; linkage and association studies; medical genetics and disease; sex chromosomes and sex differences; the biology of the germ line; epigenetics, imprinting, and transgenerational inheritance; human origins; and evolutionary and population genetics. Students taking graduate version complete additional assignments. Limited to 20 total for versions meeting together.
D. Page
7.76 Topics in Macromolecular Structure and Function
()
Prereq: Permission of instructor
Units: 3-0-6
In-depth analysis and discussion of classic and current literature, with an emphasis on the structure, function, and mechanisms of proteins and other biological macromolecules.
Staff
7.77 Nucleic Acids, Structure, Function, Evolution, and Their Interactions with Proteins
()
Prereq: 7.05, 7.51, or permission of instructor
Units: 3-0-9
Surveys primary literature, focusing on biochemical, biophysical, genetic, and combinatorial approaches for understanding nucleic acids. Topics include the general properties, functions, and structural motifs of DNA and RNA; RNAs as catalysts and as regulators of gene expression; RNA editing and surveillance, and the interaction of nucleic acids with proteins, such as zinc-finger proteins, modification enzymes, aminoacyl-tRNA synthetases and other proteins of the translational machinery. Includes some lectures but is mostly analysis and discussion of current literature in the context of student presentations.
D. Bartel, A. Jain
7.80 Fundamentals of Chemical Biology
()
(Subject meets with 5.08[J], 7.08[J])
Prereq: 5.13 and (5.07 or 7.05)
Units: 4-0-8
Spanning the fields of biology, chemistry, and engineering, this class introduces students to the principles of chemical biology and the application of chemical and physical methods and reagents to the study and manipulation of biological systems. Topics include nucleic acid structure, recognition, and manipulation; protein folding and stability, and proteostasis; bioorthogonal reactions and activity-based protein profiling; chemical genetics and small-molecule inhibitor screening; fluorescent probes for biological analysis and imaging; and unnatural amino acid mutagenesis. The class will also discuss the logic of dynamic post-translational modification reactions with an emphasis on chemical biology approaches for studying complex processes including glycosylation, phosphorylation, and lipidation. Students taking the graduate version are expected to explore the subject in greater depth.
B. Imperiali, R. Raines
7.81[J] Systems Biology
()
(Same subject as 8.591[J])
(Subject meets with 7.32)
Prereq: (18.03 and 18.05) or permission of instructor
Units: 3-0-9
Lecture: TR1-2.30 (4-159) Recitation: W EVE (4.30-6 PM) (2-147) +final
Introduction to cellular and population-level systems biology with an emphasis on synthetic biology, modeling of genetic networks, cell-cell interactions, and evolutionary dynamics. Cellular systems include genetic switches and oscillators, network motifs, genetic network evolution, and cellular decision-making. Population-level systems include models of pattern formation, cell-cell communication, and evolutionary systems biology. Students taking graduate version explore the subject in more depth.
J. Gore
Textbooks (Fall 2024)
7.82 Development, Disease and Therapeutics
()
Prereq: Permission of instructor
Units: 3-0-9 [P/D/F]
Seminar covering the key concepts and technological approaches that are used to study and treat human disease. Topics include human genome variation, germline editing, gene therapy, stem cell derived organoids, human-animal chimeras and the application of these approaches to the study and treatment of major diseases.
R. Jaenisch, R. Young
7.83 Design Principles of Biological Systems
()
(Subject meets with 7.38)
Prereq: Permission of instructor
Units: 3-0-9
TBA.
Introduces students to biological control mechanisms governing decision-making and tools to decipher, model, and perturb these mechanisms. Systems presented include signal transduction, cell cycle control, developmental biology, and the immune system. These systems provide examples of feedback and feedforward control, oscillators, kinetic proofreading, spatial and temporal averaging, and pattern formation. Students taking graduate version complete additional assignments.
Staff
No textbook information available
7.84 Advanced Concepts in Immunology
()
(Subject meets with 7.24)
Prereq: None. Coreq: 7.63; or permission of instructor
Units: 3-0-9
Provides a comprehensive and intensified understanding of the relevance of the immune system beyond immunity. Focuses on how the immune system intersects with all aspects of body homeostasis/physiology or disease and how the immune system can be manipulated therapeutically. New advances in the intersection of immunology with cancer biology, neurosciences, metabolism, aging, and maternal-fetal immunology or similar explored. Presents new modern methods and techniques applicable beyond immunology. Includes critical analysis and discussion of assigned readings. Students apply principles learned in class to generate a potential research project, presented in a written form. Students taking graduate version complete additional assignments.
H. Moura Silva, S. Spranger
7.85 The Hallmarks of Cancer
()
(Subject meets with 7.45)
Prereq: None. Coreq: 7.06; permission of instructor
Units: 4-0-8
Lecture: TR1-2.30 (32-155) Recitation: R EVE (7 PM) (26-314) or F11 (26-314) or F12 (26-314)
Provides a comprehensive introduction to the fundamentals of cancer biology and cancer treatment. Topics include cancer genetics, genomics, and epigenetics; familial cancer syndromes; signal transduction, cell cycle control, and apoptosis; cancer metabolism; stem cells and cancer; metastasis; cancer immunology and immunotherapy; conventional and molecularly-targeted therapies; and early detection and prevention. Students taking graduate version complete additional assignments.
M. Hemann, T. Jacks
Textbooks (Fall 2024)
7.86 Building with Cells
()
(Subject meets with 7.46)
Prereq: 7.03 and 7.05
Units: 4-0-8
Lecture: MW11-12.30 (26-328)
Focuses on fundamental principles of developmental biology by which cells build organs and organisms. Analyzes the pivotal role of stem cells in tissue maintenance or repair, and in treatment of disease. Explores how to integrate this knowledge with engineering tools to construct functional tissue structures. Students taking graduate version complete additional assignments.
L. Boyer, P. Li
Textbooks (Fall 2024)
7.88[J] Protein Folding in Health and Disease
(); first half of term
(Same subject as 5.48[J])
Prereq: (5.07 or 7.05) and permission of instructor
Units: 3-0-3
Focuses on understanding the chemical and biological mechanisms of protein folding, misfolding, aggregation, and quality control. Topics covered include: molecular mechanisms of protein folding; experimental and computational strategies to study protein folding; how cells fold and quality control proteins; protein misfolding and aggregation; proteostasis and human disease; strategies to address protein folding failures in disease; and protein folding in biotechnology development. Provides state-of-the-art understanding of the field, fosters ability to critically assess and use the literature, and empowers students to study and address protein folding issues in their research and beyond.
M. Shoulders
7.89[J] Topics in Computational and Systems Biology
()
(Same subject as CSB.100[J])
Prereq: Permission of instructor
Units: 2-0-10
Lecture: F11-1 (66-148)
Seminar based on research literature. Papers covered are selected to illustrate important problems and varied approaches in the field of computational and systems biology, and to provide students a framework from which to evaluate new developments. Preference to first-year CSB PhD students.
C. Burge
No textbook information available
7.91 The CRISPR Revolution: Engineering the Genome for Basic Science and Clinical Medicine
()
(Subject meets with 7.36)
Prereq: Permission of instructor
Units: 3-0-9
TBA.
Provides a conceptual and technical understanding of genome editing systems and their research and clinical applications. Focuses on fundamental CRISPR biology in bacteria, methodologies for manipulating the genome with CRISPR, and the application of genome engineering in research and medicine. Combines lectures and literature discussions with critical analysis and assigned readings, with the goal of better understanding how key discoveries were made and how these are applied in the real work. Class work includes brief writing assignments as well as a final research proposal and scientific presentation. Students taking the graduate version explore the subject in greater depth, in part through additional assignments.
F. Sánchez-Rivera, J. Weissman
No textbook information available
7.930[J] Research Experience in Biopharma
()
(Same subject as 20.930[J])
Prereq: None
Units: 2-10-0
Lecture: M1 (16-220)
Provides exposure to industrial science and develops skills necessary for success in such an environment. Under the guidance of an industrial mentor, students participate in on-site research at a local biopharmaceutical company where they observe and participate in industrial science. Serves as a real-time case study to internalize the factors that shape R&D in industry, including the purpose and scope of a project, key decision points in the past and future, and strategies for execution. Students utilize company resources and work with a scientific team to contribute to the goals of their assigned project; they then present project results to the company and class, emphasizing the logic that dictated their work and their ideas for future directions. Lecture component focuses on professional development.
Burge, Clarke
No required or recommended textbooks
7.931 Independent Study in Biology
(, )
Prereq: Permission of instructor
Units arranged [P/D/F]
TBA.
Program of study or research to be arranged with a department faculty member.
Fall: Staff
Spring: Staff
No required or recommended textbooks
7.932 Independent Study in Biology
(, )
Prereq: Permission of instructor
Units arranged
TBA.
Program of study or research to be arranged with a department faculty member.
Fall: Staff
Spring: Staff
No required or recommended textbooks
7.933 Research Rotations in Biology
(, )
Prereq: Permission of instructor
Units arranged [P/D/F]
TBA.
Introduces students to faculty participating in the Biology graduate program through a series of lab rotations, which provide broad exposure to biology research at MIT. Students select a lab for thesis research by the end of their first year. Limited to students in the Biology graduate program.
Fall: Staff
Spring: Staff
No required or recommended textbooks
7.934 Teaching Experience in Biology
(, , )
Prereq: Permission of instructor
Units arranged [P/D/F]
TBA.
For qualified graduate students in the Biology graduate program interested in teaching. Classroom or laboratory teaching under the supervision of a faculty member.
Fall: Staff
IAP: Staff
Spring: Staff
No required or recommended textbooks
7.935 Responsible Conduct in Biology
(, )
Prereq: Permission of instructor
Units arranged [P/D/F]
TBA.
Sessions focus on the responsible conduct of science. Considers recordkeeping and reporting; roles of mentor and mentee; authorship, review, and confidentiality; resolving conflicts; misfeasance and malfeasance; collaborations, competing interests, and intellectual property; and proper practices in the use of animal and human subjects. Limited to second-year graduate students in Biology.
Fall: S. Hrvatin, Y. Yamashita
Spring: S. Hrvatin, Y. Yamashita
No required or recommended textbooks
7.936 Professional Development in Biology
(, , , )
Prereq: None
Units: 0-2-0 [P/D/F]
TBA.
Required for course 7 doctoral students to gain professional perspective in career development activities such as internships, scientific meetings, and career and networking events. Written report required upon completion of activities.
Fall: Staff
IAP: Staff
Spring: Staff
Summer: Staff
No required or recommended textbooks
7.941 Research Problems
(, )
Prereq: Permission of instructor
Units arranged [P/D/F]
TBA.
Directed research in a field of biological science, but not contributory to graduate thesis.
Fall: Consult Biology Education Office
Summer: Consult Biology Education Office
No required or recommended textbooks
7.942 Research Problems
()
Prereq: Permission of instructor
Units arranged [P/D/F]
Directed research in a field of biological science, but not contributory to graduate thesis.
Consult Biology Education Office
7.95 Cancer Biology
()
Prereq: 7.85 and permission of instructor
Units: 3-0-9
Advanced seminar involving intensive analysis of historical and current developments in cancer biology. Topics address principles of apoptosis, principles of cancer biology, cancer genetics, cancer cell metabolism, tumor immunology, and therapy. Detailed analysis of research literature, including important reports published in recent years. Enrollment limited.
R. Weinberg, O. Yilmaz
7.98[J] Neural Plasticity in Learning and Memory
()
(Same subject as 9.301[J])
Prereq: Permission of instructor
Units: 3-0-6
Examination of the role of neural plasticity during learning and memory of invertebrates and mammals. Detailed critical analysis of the current literature of molecular, cellular, genetic, electrophysiological, and behavioral studies. Student-directed presentations and discussions of original papers supplemented by introductory lectures. Juniors and seniors require instructor's permission.
Staff
7.C51 Machine Learning in Molecular and Cellular Biology
()
(Subject meets with 3.C01[J], 3.C51[J], 7.C01, 10.C01[J], 10.C51[J], 20.C01[J], 20.C51[J])
Prereq: Biology (GIR), 6.100A, and 7.05; Coreq: 6.C51
Units: 2-0-4
Credit cannot also be received for 1.C01, 1.C51, 2.C01, 2.C51, 3.C01, 3.C51, 7.C01, 10.C01, 10.C51, 20.C01, 20.C51, 22.C01, 22.C51, SCM.C51
Introduces machine learning as a tool to understand natural biological systems, with an evolving emphasis on problems in molecular and cellular biology that are being actively advanced using machine learning. Students design, implement, and interpret machine learning approaches to aid in predicting protein structure, probing protein structure/function relationships, and imaging biological systems at scales ranging from the atomic to cellular. Students taking graduate version complete an additional project-based assignment. Students cannot receive credit without simultaneous completion of 6.C01.
C. Coley, J. Davis, E. Fraenkel, R. Gomez-Bombarelli
7.S930 Special Subject in Biology
(, , )
Prereq: Permission of instructor
Units arranged [P/D/F]
TBA.
Covers material in various fields of biology not offered by the regular subjects of instruction.
Fall: Staff
Spring: Staff
Summer: Staff
No required or recommended textbooks
7.S931 Special Subject in Biology
(, , )
Prereq: Permission of instructor
Units arranged [P/D/F]
TBA.
Covers material in various fields of biology not offered by the regular subjects of instruction.
Fall: Staff
Spring: Staff
Summer: Staff
No required or recommended textbooks
7.S932 Special Subject in Biology
(, , )
Not offered regularly; consult department
Prereq: Permission of instructor
Units arranged [P/D/F]
Covers material in various fields of biology not offered by the regular subjects of instruction.
Staff
7.S939 Special Subject in Biology
(, , )
Prereq: Permission of instructor
Units arranged
TBA.
Covers material in various fields of biology not offered by the regular subjects of instruction.
Fall: Staff
IAP: Staff
Spring: Staff
No required or recommended textbooks
7.THG Graduate Biology Thesis
(, , , )
Prereq: Permission of instructor
Units arranged
TBA.
Program of research leading to the writing of a Ph.D. thesis; to be arranged by the student and an appropriate MIT faculty member.
Fall: Staff
IAP: Staff
Spring: Staff
Summer: Staff
No required or recommended textbooks
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